Niklaas Colaert
Niklaas Colaert
UGent / VIB
Verified email at ugent.be
Title
Cited by
Cited by
Year
Improved visualization of protein consensus sequences by iceLogo
N Colaert, K Helsens, L Martens, J Vandekerckhove, K Gevaert
Nature methods 6 (11), 786-787, 2009
5612009
Proteomics analyses reveal the evolutionary conservation and divergence of N-terminal acetyltransferases from yeast and humans
T Arnesen, P Van Damme, B Polevoda, K Helsens, R Evjenth, N Colaert, ...
Proceedings of the National Academy of Sciences 106 (20), 8157-8162, 2009
4602009
Redox proteomics of protein-bound methionine oxidation
B Ghesquière, V Jonckheere, N Colaert, J Van Durme, E Timmerman, ...
Molecular & Cellular Proteomics 10 (5), 2011
1362011
Analysis of protein processing by N-terminal proteomics reveals novel species-specific substrate determinants of granzyme B orthologs
P Van Damme, S Maurer-Stroh, K Plasman, J Van Durme, N Colaert, ...
Molecular & Cellular Proteomics 8 (2), 258-272, 2009
1152009
Complementary positional proteomics for screening substrates of endo-and exoproteases
P Van Damme, A Staes, S Bronsoms, K Helsens, N Colaert, ...
Nature methods 7 (7), 512-515, 2010
1122010
In vitro and in vivo protein-bound tyrosine nitration characterized by diagonal chromatography
B Ghesquière, N Colaert, K Helsens, L Dejager, C Vanhaute, K Verleysen, ...
Molecular & Cellular Proteomics 8 (12), 2642-2652, 2009
1002009
compomics-utilities: an open-source Java library for computational proteomics
H Barsnes, M Vaudel, N Colaert, K Helsens, A Sickmann, FS Berven, ...
BMC bioinformatics 12 (1), 1-6, 2011
942011
Cells lacking β-actin are genetically reprogrammed and maintain conditional migratory capacity
D Tondeleir, A Lambrechts, M Müller, V Jonckheere, T Doll, D Vandamme, ...
Molecular & Cellular Proteomics 11 (8), 255-271, 2012
872012
ms_lims, a simple yet powerful open source laboratory information management system for MS‐driven proteomics
K Helsens, N Colaert, H Barsnes, T Muth, K Flikka, A Staes, E Timmerman, ...
Proteomics 10 (6), 1261-1264, 2010
872010
MS‐driven protease substrate degradomics
F Impens, N Colaert, K Helsens, K Plasman, P Van Damme, ...
Proteomics 10 (6), 1284-1296, 2010
682010
A quantitative proteomics design for systematic identification of protease cleavage events
F Impens, N Colaert, K Helsens, B Ghesquière, E Timmerman, ...
Molecular & Cellular Proteomics 9 (10), 2327-2333, 2010
672010
Analysis of the resolution limitations of peptide identification algorithms
N Colaert, S Degroeve, K Helsens, L Martens
Journal of proteome research 10 (12), 5555-5561, 2011
542011
Rover: a tool to visualize and validate quantitative proteomics data from different sources
N Colaert, K Helsens, F Impens, J Vandekerckhove, K Gevaert
Proteomics 10 (6), 1226-1229, 2010
482010
thermo-msf-parser: An Open Source Java Library to Parse and Visualize Thermo Proteome Discoverer msf Files
N Colaert, H Barsnes, M Vaudel, K Helsens, E Timmerman, A Sickmann, ...
Journal of proteome research 10 (8), 3840-3843, 2011
442011
The substrate specificity profile of human granzyme A
P Van Damme, S Maurer-Stroh, H Hao, N Colaert, E Timmerman, ...
Walter de Gruyter 391 (8), 983-997, 2010
362010
RIBAR and xRIBAR: Methods for reproducible relative MS/MS-based label-free protein quantification
N Colaert, K Gevaert, L Martens
Journal of proteome research 10 (7), 3183-3189, 2011
312011
A comparison of MS2‐based label‐free quantitative proteomic techniques with regards to accuracy and precision
N Colaert, J Vandekerckhove, K Gevaert, L Martens
Proteomics 11 (6), 1110-1113, 2011
292011
The iceLogo web server and SOAP service for determining protein consensus sequences
D Maddelein, N Colaert, I Buchanan, N Hulstaert, K Gevaert, L Martens
Nucleic acids research 43 (W1), W543-W546, 2015
252015
Combining quantitative proteomics data processing workflows for greater sensitivity
N Colaert, C Van Huele, S Degroeve, A Staes, J Vandekerckhove, ...
nature methods 8 (6), 481-483, 2011
202011
A case study on the comparison of different software tools for automated quantification of peptides
N Colaert, J Vandekerckhove, L Martens, K Gevaert
Gel-free proteomics, 373-398, 2011
152011
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Articles 1–20