Nick Goldman

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	All	Since 2016
Citations	35602	9839
h-index	57	36
i10-index	104	73

2300

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575

1725

199719981999200020012002200320042005200620072008200920102011201220132014201520162017201820192020202194 159 152 305 425 583 1066 1459 1450 1445 1683 1999 1871 1880 1947 2126 2127 2122 2210 2131 1907 1932 1921 1866 81

Co-authors

Ziheng YangRA Fisher Professor of Statistical Genetics, University College LondonVerified email at ucl.ac.uk
Simon WhelanNo longer in academiaVerified email at sandvik.com
P. Lió, Pietro Lio, P. Lio, Pietro Liò, Pie...University of CambridgeVerified email at cam.ac.uk
Rasmus NielsenUC Berkeley, University of CopenhagenVerified email at bio.ku.dk
Jeffrey L. ThorneProfessor of Genetics and Statistics, North Carolina State UniversityVerified email at statgen.ncsu.edu
Botond SiposOxford Nanopore TechnologiesVerified email at nanoporetech.com
Christophe DessimozSNSF Professor at UNIL, Professor at UCLVerified email at ucl.ac.uk
Carolin KosiolLecturer in Bioinformatics, University of St AndrewsVerified email at st-andrews.ac.uk
Ewan BirneyDirector, EMBL-EBIVerified email at ebi.ac.uk
Allen RodrigoThe Australian National UniversityVerified email at anu.edu.au
Stefan WashietlComputer Science and Artificial Intelligence Lab, MITVerified email at mit.edu
Fabio PardiResearch Fellow, CNRS, FranceVerified email at lirmm.fr
Paul BertoneBrown UniversityVerified email at brown.edu
Emily LeproustTwist BioscienceVerified email at twistbioscience.com
Ian HolmesAssociate Professor, Computational Biology, UC BerkeleyVerified email at berkeley.edu
Carninci PieroRIKEN IMS (Yokohama, JP) and Human Technopole (Milan, IT)Verified email at postman.riken.jp
Martin S. TaylorProfessor, MRC Human Genetics Unit, IGMM, University of EdinburghVerified email at igmm.ed.ac.uk
Colin SempleProfessor/Head of Bioinformatics, MRC Human Genetics Unit, University of EdinburghVerified email at igmm.ed.ac.uk
Wendy S. W. WongCoherent Logic LimitedVerified email at cornell.edu
Gregory E JordanPhD student, European Bioinformatics InstituteVerified email at ebi.ac.uk

Nick Goldman

EMBL-European Bioinformatics Institute

Verified email at ebi.ac.uk - Homepage

genome analysis evolution EMBL-EBI-Research-Group


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Initial sequencing and comparative analysis of the mouse genome AT Chinwalla, LL Cook, KD Delehaunty, GA Fewell, LA Fulton, RS Fulton, ... Nature 420 (6915), 520-562, 2002	7274*	2002
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project E Birney, JA Stamatoyannopoulos, A Dutta, R Guigó, TR Gingeras, ... Nature 447 (7146), 799-816, 2007	5242	2007
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach S Whelan, N Goldman Molecular Biology and Evolution 18 (5), 691-699, 2001	2432	2001
Codon-substitution models for heterogeneous selection pressure at amino acid sites Z Yang, R Nielsen, N Goldman, AMK Pedersen Genetics 155 (1), 431-449, 2000	2370	2000
A codon-based model of nucleotide substitution for protein-coding DNA sequences. N Goldman, Z Yang Molecular Biology and Evolution 11 (5), 725-736, 1994	2111	1994
Likelihood-based tests of topologies in phylogenetics N Goldman, JP Anderson, AG Rodrigo Systematic Biology 49 (4), 652-670, 2000	1153	2000
A high-resolution map of human evolutionary constraint using 29 mammals K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ... Nature 478 (7370), 476-482, 2011	987	2011
An algorithm for progressive multiple alignment of sequences with insertions A Löytynoja, N Goldman Proceedings of the National Academy of Sciences of the United States of …, 2005	887	2005
Statistical tests of models of DNA substitution N Goldman Journal of Molecular Evolution 36 (2), 182-198, 1993	802	1993
Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis A Löytynoja, N Goldman Science 320 (5883), 1632-1635, 2008	732	2008
Insights into hominid evolution from the gorilla genome sequence A Scally, JY Dutheil, LDW Hillier, GE Jordan, I Goodhead, J Herrero, ... Nature 483 (7388), 169-175, 2012	672	2012
Towards practical, high-capacity, low-maintenance information storage in synthesized DNA N Goldman, P Bertone, S Chen, C Dessimoz, EM LeProust, B Sipos, ... Nature 494 (7435), 77-80, 2013	646	2013
Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites WSW Wong, Z Yang, N Goldman, R Nielsen Genetics 168 (2), 1041-1051, 2004	585	2004
Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation. Z Yang, N Goldman, A Friday Molecular biology and evolution 11 (2), 316-324, 1994	487	1994
Molecular phylogenetics: state-of-the-art methods for looking into the past S Whelan, P Lio, N Goldman TRENDS in Genetics 17 (5), 262-272, 2001	472	2001
Systematic evaluation of spliced alignment programs for RNA-seq data PG Engstrom, T Steijger, B Sipos, GR Grant, A Kahles, G Raetsch, ... NATURE METHODS 10 (12), 1185-+, 2013	454	2013
Models of molecular evolution and phylogeny P Liò, N Goldman Genome research 8 (12), 1233-1244, 1998	385	1998
Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution RC Hardison, KM Roskin, S Yang, M Diekhans, WJ Kent, R Weber, ... Genome research 13 (1), 13-26, 2003	329	2003
webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser A Löytynoja, N Goldman BMC bioinformatics 11 (1), 579, 2010	316	2010
Maximum likelihood trees from DNA sequences: a peculiar statistical estimation problem Z Yang, N Goldman, A Friday Systematic Biology 44 (3), 384-399, 1995	280	1995

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