Nan Deng
Nan Deng
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Recurrent frameshift neoantigen vaccine elicits protective immunity with reduced tumor burden and improved overall survival in a Lynch syndrome mouse model
J Gebert, O Gelincik, M Oezcan-Wahlbrink, JD Marshall, ...
Gastroenterology 161 (4), 1288-1302. e13, 2021
A content-based literature recommendation system for datasets to improve data reusability–A case study on Gene Expression Omnibus (GEO) datasets
BG Patra, V Maroufy, B Soltanalizadeh, N Deng, WJ Zheng, K Roberts, ...
Journal of Biomedical Informatics 104, 103399, 2020
Restructured GEO: restructuring Gene Expression Omnibus metadata for genome dynamics analysis
G Chen, JC Ramírez, N Deng, X Qiu, C Wu, WJ Zheng, H Wu
Database 2019, bay145, 2019
An animated landscape representation of CD4+ T‐cell differentiation, variability, and plasticity: Insights into the behavior of populations versus cells
JA Rebhahn, N Deng, G Sharma, AM Livingstone, S Huang, TR Mosmann
European journal of immunology 44 (8), 2216-2229, 2014
Cytokine diversity in the Th1-dominated human anti-influenza response caused by variable cytokine expression by Th1 cells, and a minor population of uncommitted IL-2+ IFNγ-Thpp …
N Deng, JM Weaver, TR Mosmann
PLoS One 9 (5), e95986, 2014
Dynamic transcriptional signatures and network responses for clinical symptoms in influenza-infected human subjects using systems biology approaches
P Linel, S Wu, N Deng, H Wu
Journal of pharmacokinetics and pharmacodynamics 41, 509-521, 2014
Comparative molecular genomic analyses of a spontaneous rhesus macaque model of mismatch repair-deficient colorectal cancer
N Ozirmak Lermi, SB Gray, CM Bowen, L Reyes-Uribe, BK Dray, N Deng, ...
PLoS genetics 18 (4), e1010163, 2022
Optimization of the cytokine secretion assay for human IL‐2 in single and combination assays
N Deng, TR Mosmann
Cytometry Part A 87 (8), 777-783, 2015
Recombinant hepatitis B large surface antigen, successfully produced in Escherichia coli, stimulates T-cell response in mice
L Shu, N Touzjian, D Nan, N Kushner, AJ Strong, W Zeping, G Zhaohui, ...
Vaccine 24 (20), 4409-4416, 2006
A novel group of genes that cause endocrine resistance in breast cancer identified by dynamic gene expression analysis
A Asghari, K Wall, M Gill, N Del Vecchio, F Allahbakhsh, J Wu, N Deng, ...
Oncotarget 13, 600, 2022
An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries
BG Patra, B Soltanalizadeh, N Deng, L Wu, V Maroufy, C Wu, WJ Zheng, ...
Database 2020, baaa074, 2020
ImmuneData: an integrated data discovery system for immunology data repositories
N Deng, C Wu, A Yaseen, H Wu
Database 2022, baac003, 2022
Gene expression dynamic analysis reveals co-activation of Sonic Hedgehog and epidermal growth factor followed by dynamic silencing
V Maroufy, P Shah, A Asghari, N Deng, RNU Le, JC Ramirez, A Yaseen, ...
Oncotarget 11 (15), 1358, 2020
Construction of RNAi binary vector of soybean receptor-like kinase gene (rlpk2) and its soybean transformation
XP Li, N Deng, YY Ma, PL Li, Y Wang, R Zhang, NN Wang
Fen zi xi bao Sheng wu xue bao= Journal of Molecular Cell Biology 39 (1), 1-8, 2006
Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of …
N Deng, JC Ramirez, M Carey, H Miao, CA Arias, AP Rice, H Wu
Infectious Disease Modelling 4, 215-226, 2019
Exercise Training Reduces the Inflammatory Response and Promotes Intestinal Mucosa-Associated Immunity in Lynch Syndrome
N Deng, L Reyes-Uribe, JF Fahrmann, WS Thoman, MF Munsell, ...
Clinical Cancer Research 29 (21), 4361-4372, 2023
Genomic Landscape of Lynch Syndrome Colorectal Neoplasia Identifies Shared Mutated Neoantigens for Immunoprevention
AM Bolivar, F Duzagac, N Deng, L Reyes-Uribe, K Chang, W Wu, ...
Gastroenterology, 2024
Human intestinal organoids from Cronkhite-Canada syndrome patients reveal link between serotonin and proliferation
V Poplaski, C Bomidi, A Kambal, H Nguyen-Phuc, SC Di Rienzi, ...
Journal of Clinical Investigation 133 (21), e166884, 2023
Naproxen chemoprevention induces proliferation of cytotoxic lymphocytes in Lynch Syndrome colorectal mucosa
CM Bowen, N Deng, L Reyes-Uribe, ER Parra, P Rocha, LM Solis, ...
Frontiers in immunology 14, 1162669, 2023
36 Analysis of T-cell receptor sequences identifies signatures associated with neoantigen exposure in peripheral blood of lynch syndrome patients
A Bolivar, E Vilar-Sanchez, K Sinha, LR Uribe, N Deng, F Duzagac, ...
Journal for ImmunoTherapy of Cancer 10 (Suppl 2), 2022
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