| The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology M Galdzicki, KP Clancy, E Oberortner, M Pocock, JY Quinn, CA Rodriguez, ... Nature biotechnology 32 (6), 545-550, 2014 | 252 | 2014 |
| Standard virtual biological parts: a repository of modular modeling components for synthetic biology MT Cooling, V Rouilly, G Misirli, J Lawson, T Yu, J Hallinan, A Wipat Bioinformatics 26 (7), 925-931, 2010 | 103 | 2010 |
| SynBioHub: a standards-enabled design repository for synthetic biology JA McLaughlin, CJ Myers, Z Zundel, G Mısırlı, M Zhang, ID Ofiteru, ... ACS synthetic biology 7 (2), 682-688, 2018 | 62 | 2018 |
| Sharing structure and function in biological design with SBOL 2.0 N Roehner, J Beal, K Clancy, B Bartley, G Misirli, R Grunberg, ... ACS synthetic biology 5 (6), 498-506, 2016 | 61 | 2016 |
| Synthetic biology open language (SBOL) version 2.0. 0 B Bartley, J Beal, K Clancy, G Misirli, N Roehner, E Oberortner, M Pocock, ... Journal of integrative bioinformatics 12 (2), 902-991, 2015 | 54 | 2015 |
| Proteomic analysis of Bacillus subtilis strains engineered for improved production of heterologous proteins S Pohl, G Bhavsar, J Hulme, AE Bloor, G Misirli, MW Leckenby, ... Proteomics 13 (22), 3298-3308, 2013 | 47 | 2013 |
| Synthetic biology open language (SBOL) version 1.1. 0 M Galdzicki, M Wilson, CA Rodriguez, MR Pocock, E Oberortner, L Adam, ... | 33 | 2012 |
| Model annotation for synthetic biology: automating model to nucleotide sequence conversion G Misirli, JS Hallinan, T Yu, JR Lawson, SM Wimalaratne, MT Cooling, ... Bioinformatics 27 (7), 973-979, 2011 | 33 | 2011 |
| Proposed data model for the next version of the Synthetic Biology Open Language N Roehner, E Oberortner, M Pocock, J Beal, K Clancy, C Madsen, ... ACS synthetic biology 4 (1), 57-71, 2015 | 30* | 2015 |
| Synthetic biology open language (SBOL) version 2.2. 0 RS Cox, C Madsen, JA McLaughlin, T Nguyen, N Roehner, B Bartley, ... Journal of integrative bioinformatics 15 (1), 2018 | 28 | 2018 |
| A standard-enabled workflow for synthetic biology CJ Myers, J Beal, TE Gorochowski, H Kuwahara, C Madsen, ... Biochemical Society Transactions 45 (3), 793-803, 2017 | 28 | 2017 |
| The SBOL stack: a platform for storing, publishing, and sharing synthetic biology designs C Madsen, JA McLaughlin, G Mısırlı, M Pocock, K Flanagan, J Hallinan, ... ACS synthetic biology 5 (6), 487-497, 2016 | 27 | 2016 |
| Anomaly detection for IoT time-series data: A survey AA Cook, G Mısırlı, Z Fan IEEE Internet of Things Journal 7 (7), 6481-6494, 2019 | 26 | 2019 |
| libSBOLj 2.0: a java library to support SBOL 2.0 Z Zhang, T Nguyen, N Roehner, G Misirli, M Pocock, E Oberortner, ... IEEE life sciences letters 1 (4), 34-37, 2015 | 26* | 2015 |
| Harmonizing semantic annotations for computational models in biology ML Neal, M König, D Nickerson, G Mısırlı, R Kalbasi, A Dräger, K Atalag, ... Briefings in bioinformatics 20 (2), 540-550, 2019 | 25 | 2019 |
| Composable modular models for synthetic biology G Misirli, J Hallinan, A Wipat ACM Journal on Emerging Technologies in Computing Systems (JETC) 11 (3), 1-19, 2014 | 24 | 2014 |
| Data integration and mining for synthetic biology design G Mısırlı, J Hallinan, M Pocock, P Lord, JA McLaughlin, H Sauro, A Wipat ACS synthetic biology 5 (10), 1086-1097, 2016 | 21* | 2016 |
| Synthetic biology open language (SBOL) version 2.1. 0 J Beal, RS Cox, R Grünberg, J McLaughlin, T Nguyen, B Bartley, M Bissell, ... Journal of integrative bioinformatics 13 (3), 30-132, 2016 | 19 | 2016 |
| Annotation of rule-based models with formal semantics to enable creation, analysis, reuse and visualization G Misirli, M Cavaliere, W Waites, M Pocock, C Madsen, O Gilfellon, ... Bioinformatics 32 (6), 908-917, 2016 | 19 | 2016 |
| A computational workflow for the automated generation of models of genetic designs G Misirli, T Nguyen, JA McLaughlin, P Vaidyanathan, TS Jones, ... ACS synthetic biology 8 (7), 1548-1559, 2018 | 18 | 2018 |
