Michael P. Cummings
Michael P. Cummings
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Cited by
Cited by
BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics
DL Ayres, A Darling, DJ Zwickl, P Beerli, MT Holder, PO Lewis, ...
Systematic biology 61 (1), 170-173, 2012
Independent Emergence of Artemisinin Resistance Mutations Among Plasmodium falciparum in Southeast Asia
S Takala-Harrison, CG Jacob, C Arze, MP Cummings, JC Silva, ...
The Journal of infectious diseases 211 (5), 670-679, 2015
Copia-like retrotransposons are ubiquitous among plants.
DF Voytas, MP Cummings, A Koniczny, FM Ausubel, SR Rodermel
Proceedings of the National Academy of Sciences 89 (15), 7124-7128, 1992
Sampling properties of DNA sequence data in phylogenetic analysis.
MP Cummings, SP Otto, J Wakeley
Molecular Biology and Evolution 12 (5), 814-822, 1995
Comparing bootstrap and posterior probability values in the four-taxon case
MP Cummings, SA Handley, DS Myers, DL Reed, A Rokas, K Winka
Systematic biology 52 (4), 477-487, 2003
Genetic loci associated with delayed clearance of Plasmodium falciparum following artemisinin treatment in Southeast Asia
S Takala-Harrison, TG Clark, CG Jacob, MP Cummings, O Miotto, ...
Proceedings of the National Academy of Sciences 110 (1), 240-245, 2013
A large-scale, higher-level, molecular phylogenetic study of the insect order Lepidoptera (moths and butterflies)
JC Regier, C Mitter, A Zwick, AL Bazinet, MP Cummings, AY Kawahara, ...
PloS one 8 (3), e58568, 2013
Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study
JC Regier, A Zwick, MP Cummings, AY Kawahara, S Cho, S Weller, ...
BMC Evolutionary Biology 9 (1), 1-21, 2009
A genealogical approach to quantifying lineage divergence
MP Cummings, MC Neel, KL Shaw
Evolution 62 (9), 2411-2422, 2008
A gateway for phylogenetic analysis powered by grid computing featuring GARLI 2.0
AL Bazinet, DJ Zwickl, MP Cummings
Systematic biology 63 (5), 812-818, 2014
Phylogeny and evolution of Lepidoptera
C Mitter, DR Davis, MP Cummings
Annual Review of Entomology 62, 265-283, 2017
Resolving arthropod phylogeny: exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence
JC Regier, JW Shultz, ARD Ganley, A Hussey, D Shi, B Ball, A Zwick, ...
Systematic biology 57 (6), 920-938, 2008
Extreme polymorphism in a vaccine antigen and risk of clinical malaria: implications for vaccine development
SL Takala, D Coulibaly, MA Thera, AH Batchelor, MP Cummings, ...
Science translational medicine 1 (2), 2ra5-2ra5, 2009
A superfamily of Arabidopsis thaliana retrotransposons.
A Konieczny, DF Voytas, MP Cummings, FM Ausubel
Genetics 127 (4), 801-809, 1991
The evolution of plant nuclear genes
MT Clegg, MP Cummings, ML Durbin
Proceedings of the National Academy of Sciences 94 (15), 7791-7798, 1997
A molecular phylogeny for the pyraloid moths (Lepidoptera: Pyraloidea) and its implications for higher‐level classification
JC Regier, C Mitter, MA Solis, JE Hayden, B Landry, M Nuss, ...
Systematic Entomology 37 (4), 635-656, 2012
Biased data reduce efficiency and effectiveness of conservation reserve networks
J Grand, MP Cummings, TG Rebelo, TH Ricketts, MC Neel
Ecology Letters 10 (5), 364-374, 2007
BEAGLE 3: improved performance, scaling, and usability for a high-performance computing library for statistical phylogenetics
DL Ayres, MP Cummings, G Baele, AE Darling, PO Lewis, DL Swofford, ...
Systematic biology 68 (6), 1052-1061, 2019
Phylogenetic relationships of Acanthocephala based on analysis of 18S ribosomal RNA gene sequences
M García-Varela, G Pérez-Ponce de León, P de la Torre, MP Cummings, ...
Journal of Molecular Evolution 50, 532-540, 2000
A comparative evaluation of sequence classification programs
AL Bazinet, MP Cummings
BMC bioinformatics 13 (1), 1-13, 2012
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