Steven Maere

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Yves Van de PeerProfessor in Bioinformatics and Genome Biology, Ghent University, BelgiumVerified email at psb.ugent.be
Martin KuiperProfessor in Systems Biology, NTNU, NorwayVerified email at ntnu.no
Kevin VannesteSciensano (Belgian National Institute of Health)Verified email at sciensano.be
Dirk InzeHoogleraar plantenbiotechnologie, Universiteit GentVerified email at psb.ugent.be
K.J. VerstrepenProfessor, KU Leuven and Group Leader, VIBVerified email at biw.vib-kuleuven.be
Guy BaeleAssociate Professor, KU LeuvenVerified email at kuleuven.be
Brigida GallonePostdoctoral ResearcherVerified email at naturalis.nl
Frederik CoppensProject Leader, VIB, UGentVerified email at psb.vib-ugent.be
Jan SteenselskuleuvenVerified email at biw.vib-kuleuven.be
Jeroen RaesProfessor, Faculty of Medicine, Rega Institute, KU Leuven; Group Leader Microbiome, VIB, BelgiumVerified email at med.kuleuven.be
Axel MeyerProfessor of Evolutionary Biology, University of KonstanzVerified email at uni-konstanz.de
Klaas VandepoeleFull Professor, Ghent University - Group leader VIB Center for Plant Systems BiologyVerified email at psb.vib-ugent.be
Jeffrey A FawcettRIKENVerified email at soken.ac.jp
Riet De SmetPostdoc department of Plant Systems Biology (Ghent University)Verified email at psb.vib-ugent.be
Rahul A. BhosaleAssistant Professor, University of NottinghamVerified email at nottingham.ac.uk
Gerrit BeemsterProfessor of Plant Biology, University of AntwerpVerified email at uantwerpen.be
Toby H RichardsonConsultant, Advisor, EntrepreneurVerified email at basecamp-research.com
Ariel S SchwartzVerified email at cs.berkeley.edu
Zhen LiGhent UniversityVerified email at psb.ugent.be
Michiel Van BelPostdoc bioinformatics, Ghent UniversityVerified email at ugent.be

Steven Maere

Group leader, VIB ; Associate Professor, Ghent University

Verified email at psb.vib-UGent.be - Homepage

Computational systems biology evolutionary systems biology


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BiNGO: a Cytoscape plugin to assess overrepresentation of Gene Ontology categories in Biological Networks S Maere, K Heymans, M Kuiper Bioinformatics 21 (16), 3448-3449, 2005	4205	2005
Integration of biological networks and gene expression data using Cytoscape MS Cline, M Smoot, E Cerami, A Kuchinsky, N Landys, C Workman, ... Nature protocols 2 (10), 2366-2382, 2007	2541	2007
The evolutionary significance of ancient genome duplications Y Van de Peer, S Maere, A Meyer Nature Reviews Genetics 10 (10), 725-732, 2009	993	2009
Modeling gene and genome duplications in eukaryotes S Maere, S De Bodt, J Raes, T Casneuf, M Van Montagu, M Kuiper, ... Proceedings of the National Academy of Sciences 102 (15), 5454-5459, 2005	882	2005
Plants with double genomes might have had a better chance to survive the Cretaceous–Tertiary extinction event JA Fawcett, S Maere, Y Van De Peer Proceedings of the National Academy of Sciences 106 (14), 5737-5742, 2009	624	2009
Genome duplication and the origin of angiosperms S De Bodt, S Maere, Y Van de Peer Trends in ecology & evolution 20 (11), 591-597, 2005	578	2005
Domestication and divergence of Saccharomyces cerevisiae beer yeasts B Gallone, J Steensels, T Prahl, L Soriaga, V Saels, B Herrera-Malaver, ... Cell 166 (6), 1397-1410. e16, 2016	536	2016
The gain and loss of genes during 600 million years of vertebrate evolution T Blomme, K Vandepoele, S De Bodt, C Simillion, S Maere, ... Genome biology 7 (5), 1-12, 2006	408	2006
Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary K Vanneste, G Baele, S Maere, Y Van de Peer Genome research 24 (8), 1334-1347, 2014	349	2014
Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana J Van Leene, J Hollunder, D Eeckhout, G Persiau, E Van De Slijke, ... Molecular systems biology 6 (1), 397, 2010	349	2010
Convergent gene loss following gene and genome duplications creates single-copy families in flowering plants R De Smet, KL Adams, K Vandepoele, MCE Van Montagu, S Maere, ... Proceedings of the National Academy of Sciences 110 (8), 2898-2903, 2013	329	2013
Fern genomes elucidate land plant evolution and cyanobacterial symbioses FW Li, P Brouwer, L Carretero-Paulet, S Cheng, J De Vries, PM Delaux, ... Nature plants 4 (7), 460-472, 2018	285	2018
The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants A Gadeyne, C Sánchez-Rodríguez, S Vanneste, S Di Rubbo, H Zauber, ... Cell 156 (4), 691-704, 2014	219	2014
Reconstruction of ancestral metabolic enzymes reveals molecular mechanisms underlying evolutionary innovation through gene duplication K Voordeckers, CA Brown, K Vanneste, E van der Zande, A Voet, S Maere, ... PLoS biology 10 (12), e1001446, 2012	218	2012
Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana T Casneuf, S De Bodt, J Raes, S Maere, Y Van de Peer Genome biology 7 (2), 1-11, 2006	183	2006
The Arabidopsis thaliana Homolog of Yeast BRE1 Has a Function in Cell Cycle Regulation during Early Leaf and Root Growth D Fleury, K Himanen, G Cnops, H Nelissen, TM Boccardi, S Maere, ... The Plant Cell 19 (2), 417-432, 2007	181	2007
Gene duplicability of core genes is highly consistent across all angiosperms Z Li, J Defoort, S Tasdighian, S Maere, Y Van de Peer, R De Smet The Plant Cell 28 (2), 326-344, 2016	174	2016
Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution K Vanneste, S Maere, Y Van de Peer Philosophical Transactions of the Royal Society B: Biological Sciences 369 …, 2014	164	2014
Inference of genome duplications from age distributions revisited K Vanneste, Y Van de Peer, S Maere Molecular biology and evolution 30 (1), 177-190, 2013	135	2013
Gamma paleohexaploidy in the stem lineage of core eudicots: significance for MADS-box gene and species diversification D Vekemans, S Proost, K Vanneste, H Coenen, T Viaene, P Ruelens, ... Molecular biology and evolution 29 (12), 3793-3806, 2012	134	2012

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