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Hector Martinez-Seara
Hector Martinez-Seara
Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences
Verified email at uochb.cas.cz
Title
Cited by
Cited by
Year
Martini 3: a general purpose force field for coarse-grained molecular dynamics
PCT Souza, R Alessandri, J Barnoud, S Thallmair, I Faustino, ...
Nature methods 18 (4), 382-388, 2021
6602021
Anomalous diffusion of phospholipids and cholesterols in a lipid bilayer and its origins
JH Jeon, HMS Monne, M Javanainen, R Metzler
Physical review letters 109 (18), 188103, 2012
3192012
Protein crowding in lipid bilayers gives rise to non-Gaussian anomalous lateral diffusion of phospholipids and proteins
JH Jeon, M Javanainen, H Martinez-Seara, R Metzler, I Vattulainen
Physical Review X 6 (2), 021006, 2016
2952016
MEMBPLUGIN: studying membrane complexity in VMD
R Guixà-González, I Rodriguez-Espigares, JM Ramírez-Anguita, ...
Bioinformatics 30 (10), 1478-1480, 2014
2452014
Anomalous and normal diffusion of proteins and lipids in crowded lipid membranes
M Javanainen, H Hammaren, L Monticelli, JH Jeon, MS Miettinen, ...
Faraday discussions 161, 397-417, 2013
2182013
Interplay of unsaturated phospholipids and cholesterol in membranes: effect of the double-bond position
H Martinez-Seara, T Róg, M Pasenkiewicz-Gierula, I Vattulainen, ...
Biophysical journal 95 (7), 3295-3305, 2008
1752008
Excessive aggregation of membrane proteins in the Martini model
M Javanainen, H Martinez-Seara, I Vattulainen
PloS one 12 (11), e0187936, 2017
1652017
Membrane cholesterol access into a G-protein-coupled receptor
R Guixà-González, JL Albasanz, I Rodriguez-Espigares, M Pastor, F Sanz, ...
Nature communications 8 (1), 14505, 2017
1512017
Cholesterol induces specific spatial and orientational order in cholesterol/phospholipid membranes
H Martinez-Seara, T Rog, M Karttunen, I Vattulainen, R Reigada
PloS one 5 (6), e11162, 2010
1362010
Membrane omega-3 fatty acids modulate the oligomerisation kinetics of adenosine A2A and dopamine D2 receptors
R Guixà-González, M Javanainen, M Gómez-Soler, B Cordobilla, ...
Scientific reports 6 (1), 19839, 2016
1152016
Accurate binding of sodium and calcium to a POPC bilayer by effective inclusion of electronic polarization
J Melcr, H Martinez-Seara, R Nencini, J Kolafa, P Jungwirth, OHS Ollila
The Journal of Physical Chemistry B 122 (16), 4546-4557, 2018
1072018
Atomistic Simulations of Functional Au144(SR)60 Gold Nanoparticles in Aqueous Environment
E Heikkilä, AA Gurtovenko, H Martinez-Seara, H Häkkinen, ...
The Journal of Physical Chemistry C 116 (17), 9805-9815, 2012
1052012
A practical guide to biologically relevant molecular simulations with charge scaling for electronic polarization
E Duboue-Dijon, M Javanainen, P Delcroix, P Jungwirth, ...
The Journal of Chemical Physics 153 (5), 2020
912020
Nanoscale membrane domain formation driven by cholesterol
M Javanainen, H Martinez-Seara, I Vattulainen
Scientific reports 7 (1), 1143, 2017
912017
Effect of double bond position on lipid bilayer properties: insight through atomistic simulations
H Martinez-Seara, T Róg, M Pasenkiewicz-Gierula, I Vattulainen, ...
The Journal of Physical Chemistry B 111 (38), 11162-11168, 2007
852007
Cationic Au nanoparticle binding with plasma membrane-like lipid bilayers: potential mechanism for spontaneous permeation to cells revealed by atomistic simulations
E Heikkila, H Martinez-Seara, AA Gurtovenko, M Javanainen, H Hakkinen, ...
The Journal of Physical Chemistry C 118 (20), 11131-11141, 2014
822014
Diffusion of integral membrane proteins in protein-rich membranes
M Javanainen, H Martinez-Seara, R Metzler, I Vattulainen
The journal of physical chemistry letters 8 (17), 4308-4313, 2017
792017
doGlycans–Tools for Preparing Carbohydrate Structures for Atomistic Simulations of Glycoproteins, Glycolipids, and Carbohydrate Polymers for GROMACS
R Danne, C Poojari, H Martinez-Seara, S Rissanen, F Lolicato, T Róg, ...
Journal of chemical information and modeling 57 (10), 2401-2406, 2017
772017
Role of cardiolipins in the inner mitochondrial membrane: insight gained through atom-scale simulations
T Róg, H Martinez-Seara, N Munck, M Oresic, M Karttunen, I Vattulainen
The Journal of Physical Chemistry B 113 (11), 3413-3422, 2009
732009
Influence of cis double-bond parametrization on lipid membrane properties: how seemingly insignificant details in force-field change even qualitative trends
H Martinez-Seara, T Róg, M Karttunen, R Reigada, I Vattulainen
The Journal of chemical physics 129 (10), 2008
612008
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Articles 1–20