Michael C. Schatz

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Citations	54901	29920
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Fritz J SedlazeckHuman Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston TX 77030Verified email at bcm.edu
Maria NattestadOMGenomics LabsVerified email at google.com
Han FangGenAI, MetaVerified email at fb.com
Melanie KirscheJohns Hopkins UniversityVerified email at jhu.edu
Srividya RamakrishnanSenior Research Data Analyst, Schatz Lab , Johns Hopkins UniversityVerified email at jhu.edu
Michael AlongePh.D. Student, Johns Hopkins UniversityVerified email at jh.edu
Sergey AganezovGenomic Applications at Oxford Nanopore Technologies, IncVerified email at nanoporetech.com
Giuseppe NarzisiAssociate Director, Computational Biology, New York Genome CenterVerified email at nygenome.org
Timothy Rhyker Ranallo-BenavidezTranslational Genomics Research InstituteVerified email at tgen.org
Sam KovakaJohns Hopkins UniversityVerified email at jhu.edu
Shujun OuOhio State UniversityVerified email at osu.edu
Ruibang LuoComputer Science, University of Hong KongVerified email at cs.hku.hk
Robert AboukhalilBioinformatics Software EngineerVerified email at chanzuckerberg.com
Enis AfganResearch Scientist, Johns Hopkins UniversityVerified email at jhu.edu
Samantha ZarateRegeneron Genetics CenterVerified email at alumni.stanford.edu
Arun DasComputer Science PhD Student, Johns Hopkins UniversityVerified email at jhu.edu
Aysam Guerlerwww.guerler.orgVerified email at guerler.org
Stephen MosherJohns Hopkins UniversityVerified email at jhu.edu
Dannon BakerJohns Hopkins UniversityVerified email at jhu.edu

Michael C. Schatz

Bloomberg Distinguished Professor, Johns Hopkins University

Verified email at cs.jhu.edu - Homepage

Computer Science Computational Biology Bioinformatics Genomics Epigenomics


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The contribution of de novo coding mutations to autism spectrum disorder I Iossifov, BJ O'Roak, SJ Sanders, M Ronemus, N Krumm, D Levy, ... Nature 515, 216-21, 2014	2767	2014
The complete sequence of a human genome S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ... Science 376 (6588), 44-53, 2022	2580	2022
Evolution of genes and genomes on the Drosophila phylogeny Nature 450 (7167), 203-218, 2007	2289	2007
Phased diploid genome assembly with single-molecule real-time sequencing CS Chin, P Peluso, FJ Sedlazeck, M Nattestad, GT Concepcion, A Clum, ... Nature methods 13 (12), 1050-1054, 2016	1867	2016
Big data: astronomical or genomical? ZD Stephens, SY Lee, F Faghri, RH Campbell, C Zhai, MJ Efron, R Iyer, ... PLoS biology 13 (7), e1002195, 2015	1773	2015
De novo gene disruptions in children on the autistic spectrum I Iossifov, M Ronemus, D Levy, Z Wang, I Hakker, J Rosenbaum, ... Neuron 74 (2), 285-299, 2012	1714	2012
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome AM Wenger, P Peluso, WJ Rowell, PC Chang, RJ Hall, GT Concepcion, ... Nature biotechnology 37 (10), 1155-1162, 2019	1554	2019
GenomeScope: fast reference-free genome profiling from short reads GW Vurture, FJ Sedlazeck, M Nattestad, CJ Underwood, H Fang, ... Bioinformatics 33 (14), 2202-2204, 2017	1520	2017
Accurate detection of complex structural variations using single-molecule sequencing FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ... Nature methods 15 (6), 461-468, 2018	1454	2018
A whole-genome assembly of the domestic cow, Bos taurus AV Zimin, AL Delcher, L Florea, DR Kelley, MC Schatz, D Puiu, ... Genome biology 10, 1-10, 2009	1391	2009
KBase: the United States department of energy systems biology knowledgebase AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ... Nature biotechnology 36 (7), 566-569, 2018	1370	2018
Genome Sequence of Aedes aegypti, a Major Arbovirus Vector V Nene, JR Wortman, D Lawson, B Haas, C Kodira, Z Tu, B Loftus, Z Xi, ... Science 316 (5832), 1718-1723, 2007	1366	2007
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ... Nature, 991-996, 2008	1271	2008
Hybrid error correction and de novo assembly of single-molecule sequencing reads S Koren, MC Schatz, BP Walenz, J Martin, JT Howard, G Ganapathy, ... Nature biotechnology 30 (7), 693-700, 2012	1231	2012
GenomeScope 2.0 and Smudgeplot for reference-free profiling of polyploid genomes TR Ranallo-Benavidez, KS Jaron, MC Schatz Nature communications 11 (1), 1432, 2020	1094	2020
Draft Genome Sequence of the Sexually Transmitted Pathogen Trichomonas vaginalis JM Carlton, RP Hirt, JC Silva, AL Delcher, M Schatz, Q Zhao, JR Wortman, ... Science 315 (5809), 207-212, 2007	1024	2007
CloudBurst: highly sensitive read mapping with MapReduce MC Schatz Bioinformatics 25 (11), 1363-1369, 2009	947	2009
GAGE: A critical evaluation of genome assemblies and assembly algorithms SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ... Genome research 22 (3), 557-567, 2012	902	2012
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... Gigascience 2 (1), 2047-217X-2-10, 2013	818	2013
The advantages of SMRT sequencing RJ Roberts, MO Carneiro, MC Schatz Genome biology 14, 1-4, 2013	756	2013

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