| Structure-based protein function prediction using graph convolutional networks V Gligorijević, PD Renfrew, T Kosciolek, JK Leman, D Berenberg, ... Nature communications 12 (1), 3168, 2021 | 339 | 2021 |
| The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ... Genome biology 20 (1), 1-23, 2019 | 293 | 2019 |
| Methods for biological data integration: perspectives and challenges V Gligorijević, N Pržulj Journal of the Royal Society Interface 12 (112), 20150571, 2015 | 270 | 2015 |
| Integrative methods for analyzing big data in precision medicine V Gligorijević, N Malod‐Dognin, N Pržulj Proteomics 16 (5), 741-758, 2016 | 189 | 2016 |
| deepNF: deep network fusion for protein function prediction V Gligorijević, M Barot, R Bonneau Bioinformatics 34 (22), 3873-3881, 2018 | 179 | 2018 |
| Non-negative matrix factorizations for multiplex network analysis V Gligorijević, Y Panagakis, S Zafeiriou IEEE transactions on pattern analysis and machine intelligence 41 (4), 928-940, 2018 | 85 | 2018 |
| Fuse: multiple network alignment via data fusion V Gligorijević, N Malod-Dognin, N Pržulj Bioinformatics 32 (8), 1195-1203, 2016 | 61 | 2016 |
| Co-evolutionary mechanisms of emotional bursts in online social dynamics and networks B Tadić, V Gligorijević, M Mitrović, M Šuvakov Entropy 15 (12), 5084-5120, 2013 | 60 | 2013 |
| Patient-specific data fusion for cancer stratification and personalised treatment V Gligorijević, N Malod-Dognin, N Pržulj Biocomputing 2016: Proceedings of the Pacific Symposium, 321-332, 2016 | 54 | 2016 |
| How the online social networks are used: dialogues-based structure of MySpace M Šuvakov, M Mitrović, V Gligorijević, B Tadić Journal of the Royal Society Interface 10 (79), 20120819, 2013 | 45 | 2013 |
| Integration of molecular network data reconstructs Gene Ontology V Gligorijević, V Janjić, N Pržulj Bioinformatics 30 (17), i594-i600, 2014 | 42 | 2014 |
| Function-guided protein design by deep manifold sampling V Gligorijević, D Berenberg, S Ra, A Watkins, S Kelow, K Cho, R Bonneau bioRxiv, 2021.12. 22.473759, 2021 | 25 | 2021 |
| Structure and stability of online chat networks built on emotion-carrying links V Gligorijević, M Skowron, B Tadić Physica A: Statistical Mechanics and its Applications 392 (3), 538-543, 2013 | 20 | 2013 |
| Fusion and community detection in multi-layer graphs V Gligorijević, Y Panagakis, S Zafeiriou 2016 23rd International Conference on Pattern Recognition (ICPR), 1327-1332, 2016 | 18 | 2016 |
| Equifold: Protein structure prediction with a novel coarse-grained structure representation JH Lee, P Yadollahpour, A Watkins, NC Frey, A Leaver-Fay, S Ra, K Cho, ... bioRxiv, 2022.10. 07.511322, 2022 | 15 | 2022 |
| Protein structural alignments from sequence JT Morton, CEM Strauss, R Blackwell, D Berenberg, V Gligorijevic, ... BioRxiv, 2020.11. 03.365932, 2020 | 14 | 2020 |
| Directed networks of online chats: Content-based linking and social structure V Gligorijevic, M Skowron, B Tadic 2012 Eighth International Conference on Signal Image Technology and Internet …, 2012 | 13 | 2012 |
| NetQuilt: deep multispecies network-based protein function prediction using homology-informed network similarity M Barot, V Gligorijević, K Cho, R Bonneau Bioinformatics 37 (16), 2414-2422, 2021 | 10 | 2021 |
| Network wiring of pleiotropic kinases yields insight into protective role of diabetes on aneurysm A Sarajlić, V Gligorijević, D Radak, N Pržulj Integrative Biology 6 (11), 1049-1057, 2014 | 9 | 2014 |
| Structure-based protein function prediction using graph convolutional networks. Nat. Commun. 12, 3168 V Gligorijevic, PD Renfrew, T Kosciolek, JK Leman, D Berenberg, ... | 8 | 2021 |
Natasa Przulj, PhD, FBCS, MAEICREA Research Professor at Barcelona Supercomputing Center; Professor, Computer Science, UCLVerified email at bsc.es
