| The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces AM Altenhoff, NM Glover, CM Train, K Kaleb, A Warwick Vesztrocy, ... Nucleic acids research 46 (D1), D477-D485, 2018 | 244 | 2018 |
| OMA orthology in 2021: website overhaul, conserved isoforms, ancestral gene order and more AM Altenhoff, CM Train, KJ Gilbert, I Mediratta, T Mendes de Farias, D Moi, ... Nucleic Acids Research, 2020 | 191 | 2020 |
| The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals FB Bastian, J Roux, A Niknejad, A Comte, SS Fonseca Costa, ... Nucleic acids research 49 (D1), D831-D847, 2021 | 168 | 2021 |
| Querying knowledge graphs in natural language S Liang, K Stockinger, TM De Farias, M Anisimova, M Gil Journal of big Data 8 (1), 3, 2021 | 75 | 2021 |
| A performance benchmark over semantic rule checking approaches in construction industry P Pauwels, TM de Farias, C Zhang, A Roxin, J Beetz, J De Roo, C Nicolle Advanced Engineering Informatics 33, 68-88, 2017 | 65 | 2017 |
| IfcWoD, Semantically Adapting IFC Model Relations into OWL Properties TM de Farias, A Roxin, C Nicolle Proceedings of the 32nd CIB W78 Conference on Information Technology in …, 2015 | 63* | 2015 |
| Enabling semantic queries across federated bioinformatics databases AC Sima, T Mendes de Farias, E Zbinden, M Anisimova, M Gil, ... Database 2019, baz106, 2019 | 56 | 2019 |
| A rule-based methodology to extract building model views TM Farias, A Roxin, C Nicolle Automation in Construction 92, 214-229, 2018 | 44 | 2018 |
| SWRL Rule-selection Methodology for Ontology Interoperability TM De Farias, A Roxin, C Nicolle Data & Knowledge Engineering, 2015 | 44 | 2015 |
| Cobieowl, an owl ontology based on cobie standard MT Farias, A Roxin, C Nicolle On the Move to Meaningful Internet Systems: OTM 2015 Conferences …, 2015 | 38 | 2015 |
| Ten years of collaborative progress in the quest for orthologs B Linard, I Ebersberger, SE McGlynn, N Glover, T Mochizuki, M Patricio, ... Molecular biology and evolution 38 (8), 3033-3045, 2021 | 35 | 2021 |
| A rule based system for semantical enrichment of building information exchange TM De Farias, A Roxin, C Nicolle CEUR Proceedings of RuleML2014, the 8th International Web Rule Symposium …, 2014 | 29 | 2014 |
| FOWLA, a federated architecture for ontologies TM Farias, A Roxin, C Nicolle Rule Technologies: Foundations, Tools, and Applications: 9th International …, 2015 | 27 | 2015 |
| Semantic integration and enrichment of heterogeneous biological databases AC Sima, K Stockinger, TM de Farias, M Gil Evolutionary Genomics: Statistical and Computational Methods, 655-690, 2019 | 19 | 2019 |
| Querying and reasoning over large scale building data sets: an outline of a performance benchmark P Pauwels, TM De Farias, C Zhang, A Roxin, J Beetz, J De Roo, C Nicolle Proceedings of the International Workshop on Semantic Big Data, 1-6, 2016 | 18 | 2016 |
| INODE: building an end-to-end data exploration system in practice S Amer-Yahia, G Koutrika, M Braschler, D Calvanese, D Lanti, ... ACM SIGMOD Record 50 (4), 23-29, 2022 | 16 | 2022 |
| Accessing scientific data through knowledge graphs with Ontop D Calvanese, D Lanti, TM De Farias, A Mosca, G Xiao Patterns 2 (10), 2021 | 16* | 2021 |
| Bio-SODA: Enabling Natural Language Question Answering over Knowledge Graphs without Training Data AC Sima, TM de Farias, M Anisimova, C Dessimoz, M Robinson-Rechavi, ... In 33rd International Conference on Scientific and Statistical Database …, 2021 | 13 | 2021 |
| Semantic web technologies for implementing cost-effective and interoperable building information modeling TM De Farias, AM Roxin, C Nicolle Proceedings of the 14th International Conference on Informatics in Economy …, 2015 | 12 | 2015 |
| Leveraging logical rules for efficacious representation of large orthology datasets TM de Farias, H Chiba, JT Fernández-Breis Proceedings of the 10th International Semantic Web Applications and Tools …, 2017 | 10 | 2017 |
Christophe DessimozProfessor at UNIL and Director of SIB Swiss Institute of BioinformaticsVerified email at unil.ch
